Ecological genomics predicts climate vulnerability in an endangered Southwestern songbird. (in press)
Details
Genotyping-by-sequencing of genome-wide microsatellite loci reveals fine-scale harvest composition in a coastal Atlantic salmon fishery. (2018)
Details
doi-link
Genomic divergence across ecological gradients in the Central African rainforest songbird (Andropadus virens). (2017)
Details
doi-link
dryad
Genetic assignment with isotopes and habitat suitability (GAIAH), a Migratory Bird Case Study. (2017)
Details
doi-link
github
dryad
Purging putative siblings from population genetic data sets: a cautionary view. (2017)
Details
doi-link
github
Abundance estimates and confidence intervals for the run composition of returning salmonids. (2017)
Details
doi-link
github
parallelnewhybrid: an R package for the parallelization of hybrid detection using NEWHYBRIDS. (2017)
Details
doi-link
Bayesian pedigree inference with small numbers of single nucleotide polymorphisms via a factor-graph representation. (2016)
Details
doi-link
github
Genetic stock composition of marine bycatch reveals disproportional impacts on depleted river herring genetic stocks. (2015)
Details
doi-link
github
Stock composition and ocean spatial distribution inference from California recreational Chinook salmon fisheries using genetic stock identification. (2015)
Details
doi-link
The invasion of an Atlantic Ocean river basin in Patagonia by Chinook salmon: new insights from SNPs. (2015)
Details
doi-link
github
Fauna crime: elucidating the potential source and introduction history of European smelt (Osmerus eperlanus L.) into Lake Storsjoen, Norway. (2015)
Details
doi-link
A role for migration-linked genes and genomic islands in divergence of a songbird. (2014)
Details
doi-link
Evaluation of a single nucleotide polymorphism baseline for genetic stock identifi cation of Chinook Salmon (Oncorhynchus tshawytscha) in the California Current large marine ecosystem.. (2014)
Details
doi-link
dryad
Comment on `Bayesian parentage analysis with systematic accountability of genotyping error, missing data and false matching'. (2014)
Details
doi-link
github
Next-generation sequencing for molecular ecology: a caveat regarding pooled samples. (2014)
Details
doi-link
dryad
Population Structure of Steelhead in Coastal California. (2014)
Details
doi-link
Use of Genetic Stock Identification Data for Comparison of the Ocean Spatial Distribution, Size at Age, and Fishery Exposure of an Untagged Stock and Its Indicator: California Coastal versus Klamath River Chinook Salmon. (2014)
Details
doi-link
Large-scale parentage analysis reveals reproductive patterns and heritability of spawn timing in a hatchery population of steelhead (Oncorhynchus mykiss). (2013)
Details
doi-link
A validation of parentage-based tagging using hatchery steelhead in the Snake River basin. (2013)
Details
doi-link
Long-term population size of the North Atlantic humpback whale within the context of worldwide population structure. (2013)
Details
doi-link
Large-scale parentage inference with SNPs: an efficient algorithm for statistical confidence of parent pair allocations. (2012)
Details
doi-link
Differences in timing of migration and response to sexual signalling drive asymmetric hybridization across a migratory divide. (2012)
Details
doi-link
A new version of PRT software for sibling groups reconstruction with comments regarding several issues in the sibling reconstruction problem. (2012)
Details
doi-link
Application of a method for estimating effective population size and admixture using diagnostic single nucleotide polymorphisms (SNPs): implications for conservation of threatened Paiute cutthroat trout (Oncorhynchus clarkii seleniris) in Silver King Creek, California. (2011)
Details
doi-link
Small founding number and low genetic diversity in an introduced species exhibiting limited invasion success (speckled dace, Rhinichthys osculus). (2011)
Details
doi-link
Evidence for the existence of a native population of sockeye salmon (Oncorhynchus nerka) and subsequent introgression with introduced populations in a Pacific Northwest watershed. (2011)
Details
doi-link
Steelhead growth in a small central California watershed: upstream and estuarine rearing patterns. (2008)
Details
doi-link
Hybridization between spring-and fall-run Chinook salmon returning to the Trinity River, California. (2008)
Details
doi-link
Assessing the power of informative subsets of loci for population assignment: standard methods are upwardly biased. (2010)
Details
doi-link
Are Antarctic minke whales unusually abundant because of 20th century whaling?. (2010)
Details
doi-link
Polyploid microsatellite data reveal stock complexity among estuarine North American green sturgeon (Acipenser medirostris). (2009)
Details
doi-link
Over the falls? Rapid evolution of ecotypic differentiation in steelhead/rainbow trout (Oncorhynchus mykiss). (2009)
Details
doi-link
Multiple paternity increases effective population size. (2009)
Details
doi-link
The influence of family groups on inferences made with the program Structure. (2008)
Details
doi-link
Population genetic structure and ancestry of Oncorhynchus mykiss populations above and below dams in south-central California. (2009)
Details
doi-link
Bayesian inference of species hybrids using multilocus dominant genetic markers. (2008)
Details
doi-link
An improved method for predicting the accuracy of genetic stock identification. (2008)
Details
doi-link
Estimation of the number of individuals founding colonized populations. (2007)
Details
doi-link
Multiple paternity in viviparous kelp rockfish, Sebastes atrovirens. (2008)
Details
doi-link
The power of single nucleotide polymorphisms for large-scale parentage inference. (2006)
Details
doi-link
An efficient Monte Carlo method for estimating Ne from temporally spaced samples using a coalescent-based likelihood. (2005)
Details
doi-link
High levels of statistical uncertainty in gametic recapture estimates of male abundance in humpback whales. (2005)
Details
spip 1.0: a program for simulating pedigrees and genetic data in age-structured populations. (2005)
Details
doi-link
Population-genetic basis of haplotype blocks in the 5q31 region. (2004)
Details
doi-link
Orr's quantitative trait loci sign test under conditions of trait ascertainment. (2003)
Details
Finding haplotype block boundaries by using the minimum-description-length principle. (2003)
Details
doi-link
A model-based method for identifying species hybrids using multilocus genetic data. (2002)
Details
Improving the estimation of bacterial allele frequencies. (2001)
Details
Monte Carlo evaluation of the likelihood for Ne from temporally spaced samples. (2000)
Details